rs49019745 SNP Detail

Summary

• ID
  rs49019745
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr14:66999715 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TCCAGCTGGA AGAGGGGTTC
  TTATGCCCTC TTCTGGCCTC TTCGGTCACT GCACACACAC ATATGCATAA CATTAAAAAA
  ACATGAAATA AATCTTTTTA AAAAGAAGAA TTGTAATCTT GTCCTCATAG AATTAGGTAA
  AAATATTAAA CAAATTACAA AATAAGGAAC CATTTCTTTT CCTTTATCCT CAACTAAAAC
  K
  CCATGGTATA GGCTGAACAT ACCCAAAGGT ACTTCTGTCC ATCACTTTAA TGTTTCAAAC
  ATGTGCTCTA TGATTCTAAA CTGAGCATGC ATGTGTGTGT GTGCAAGAAT GCACTCATTC
  CCACATGATC AAGTATGAGG ACCAGGATTC ACTCCCCACC ATCCACTTAG GGAGAAAAAG
  CATGGTGGTG CCCGTTTGTA                                            
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss62440235	NES17246792	PERLEGEN	MM_PANEL2	f	SNP	G	G	G	G	G	G	T	G	G	G	T	G	G	T	G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs49019745					SNP	G	G	G	G	G	G	T	G	G	G	T	G	G	T	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss62440235	NES17246792	PERLEGEN	MM_PANEL	f	SNP	G/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr14:66999715 () rs orientation: forward

Symbol	Name	Function Class
Adra1a	adrenergic receptor, alpha 1a	within coordinates
Rr290067	regulatory region 290067	within coordinates
Rr293226	regulatory region 293226	1486 bp proximal
Rr296052	regulatory region 296052	93 bp distal
Rr389792	regulatory region 389792	389 bp upstream