rs49028973 SNP Detail

Summary

• ID
  rs49028973
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:43345600 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GTTTCTTCAC AAGTGGCAAA
  CTCAACACCA GCTTCTCTTG TTGGTCTCCT ATCAGGGCCA ATCTCAGTAG GAACTATTAC
  ATGATTGAGT GGAGAGAAGT TGTAACTTTC ATTTTCCATT GCTTTGTAGG GCAGCCCTCT
  CACGTGTAGG CATGACCTGT GGTGCTCTGC ATTGTGAGCT TGCTGTGGTC ATAAGTTCTT
  K
  AAAGACAGTA GTTGATGTCA TAGCCAAAAC CAAGGTCACT GTGTTCTTCA TAGTCCCCAG
  AGTCTGCACT ATAAACATCA GACTTGATCA TACCTAGGCC TGGCTGTTTC ATAATGCCAA
  TGCACCTCTG GGCTATGCCA GGTTAGTTAT AGAACCAAGT CCTCTGAAAA GATTTTCAGA
  GGTGAATCAG ATGACGACCT                                            
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J
ss135056888	ENSMUSSNP3864827	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J
rs49028973					SNP	T	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:43345600 () rs orientation: forward

Symbol	Name	Function Class
Gm18865	predicted gene, 18865	within coordinates