rs49035214 SNP Detail

Summary

• ID
  rs49035214
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr8:65143361 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TCAATCAGTG AATTTAAAGC
  AGAATCCAGA GTGTTACATC AGAGCCTGTG CGTAAAGGTA CCAACTCTGA CAGCCTGGCT
  TTTATTTCAA GGACCTGCAG GGTGGAAGAA AGAGCCAGCT TCTGAAAGTT GACCTTTGAC
  TTTCACACAC CATGATGTGC ATACACGGAA GCACATGCAT GCATGGATAA ATAAATAATA
  R
  AGGTTTTACA AACAAATCCC GAAGGTACTT CTGCGATGAA ATTACTTAAG GTAGGTAGTC
  TGCTTCATAA GGGGTCTGAG CAACATTAGA GTTTGTAAAT TTCCAGAATT TGTGCATTTT
  CTGCCCCCTG TGGGGCGGCA CTCGTCAATG TCCCTGATCT ATGAGTCCCT AGGATTCTTT
  TCCATGAGTT GGCACAGACA                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	CAST/EiJ	FVB/NJ	KK/HlJ	MOLF/EiJ	NZW/LacJ	PWD/PhJ
ss60622507	NES16302431	PERLEGEN	MM_PANEL2	f	SNP	G	A	A	A	A	A
SNP Consensus Information
SNP					Consensus Type	CAST/EiJ	FVB/NJ	KK/HlJ	MOLF/EiJ	NZW/LacJ	PWD/PhJ
rs49035214					SNP	G	A	A	A	A	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss60622507	NES16302431	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr8:65143361 () rs orientation: forward

Symbol	Name	Function Class
Cpe	carboxypeptidase E	within coordinates
Rr664168	regulatory region 664168	1770 bp distal
Rr664169	regulatory region 664169	1223 bp distal
Tssr81419	transcription start site region 81419	839 bp upstream