rs49035805 SNP Detail

Summary

• ID
  rs49035805
• Variation Type
  SNP
• Alleles
  G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr9:40988980 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        CCATC CAGCCTGATG GGTTGCCAGC
  G
  GAGAGGAAGG CTGGCATCTT CCATC                                      
  
  G = G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	DBA/2J	LG/J	SM/J
ss136344795	ENSMUSSNP6802687	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	G
ss322922269	CHEV_9_40885767	CHEVERUD	SCREENING_POP	f	SNP			G	G
SNP Consensus Information
SNP					Consensus Type	A/J	DBA/2J	LG/J	SM/J
rs49035805					SNP	G	G	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr9:40988980 () rs orientation: forward

Symbol	Name	Function Class
D9Dcr138	DNA Segment, Chr 9, Derry C. Roopenian 138	972 bp distal
Rr206246	regulatory region 206246	1620 bp proximal
Tssr88989	transcription start site region 88989	1962 bp upstream
Ubash3b	ubiquitin associated and SH3 domain containing, B	within coordinates