rs49038860 SNP Detail

Summary

• ID
  rs49038860
• Variation Type
  SNP
• Alleles
  A

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr2:103911610 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        CTTACTCAGT TTGTCCACCA AGTAATGGCT GCCCTTTGTT
  AAAACCAGTT GGTCACCAAG TACTGGGCAC TAAGCATTTT CTATATACTT TATACAAAAA
  A
  GGCACTTCCC ACATAACCCT TAAGGCAATT TTCTGTATGA CAGATGAGAA AATGGAGGAT
  CAGATAACAC AGCAGGCAAA GGTCAAGCAG CCAACATAG                       
  
  A = A
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	DBA/2J
ss147142901	ENSMUSSNP6802858	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	DBA/2J
rs49038860					SNP	A	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:103911610 () rs orientation: forward

Symbol	Name	Function Class
Cd59b	CD59b antigen	Intron
Rr562021	regulatory region 562021	264 bp proximal
Rr562022	regulatory region 562022	1286 bp proximal