rs49043336 SNP Detail

Summary

• ID
  rs49043336
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr2:152493055 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        AAATG TCTGTTTCTT GTCAGGCATG
  R
  TGGTGGCGCA TGCCTTTAAT CCCAG                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
ss147970813	ENSMUSSNP5365585	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	A	G
ss320562879	CHEV_2_152476871	CHEVERUD	SCREENING_POP	f	SNP				G	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
rs49043336					SNP	G	A	G	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:152493055 () rs orientation: forward

Symbol	Name	Function Class
1700030C14Rik	RIKEN cDNA 1700030C14 gene	1748 bp downstream
D2Ertd691e	DNA segment, Chr 2, ERATO Doi 691, expressed	19 bp distal
Gm31791	predicted gene, 31791	1994 bp downstream
Rr374088	regulatory region 374088	962 bp upstream
Rr567410	regulatory region 567410	1717 bp proximal