rs49044864 SNP Detail

Summary

• ID
  rs49044864
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr10:20706059 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GGAAGGAATC AAGGAAGACA
  TTACCTCCTG TGAGCCTCAG TCAACAGGAA TGTGAAAATA AACTCAGCTA AGGGTCAGCC
  TAAGAAGAAA GCAGTGCCAG GCGAGAATCC AGGCTGAGCG ACAGACAGTA ATGAGAATAC
  AGGAAACGAC TTCTTAGCGG TGACTGAGTT CTAGAAGGTA GTATGTGAAA GACTCAGGAA
  S
  TGGACAGAGG AAATGGCTAA AGAGTAAAAC AGGATGAGAG CATCCTTCTT CCGACTACGT
  ATAGTTATTC TATGGCTTTA GTAATTTAAG CACATGGTTA GTAATTTATT AATTCAGCGA
  CCCTAAGGGC AAGAAATACA GTGCTTTGCA TAATCTTTGC ATTAATAGAT ACCTGTCAAA
  GCACAACTTT TAAAAAGTAC                                            
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	AKR/J	CAST/EiJ	KK/HlJ	MOLF/EiJ
ss52173859	NES15231473	PERLEGEN	MM_PANEL2	f	SNP	C	C	G	C	G
SNP Consensus Information
SNP					Consensus Type	A/J	AKR/J	CAST/EiJ	KK/HlJ	MOLF/EiJ
rs49044864					SNP	C	C	G	C	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss52173859	NES15231473	PERLEGEN	MM_PANEL	f	SNP	C/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr10:20706059 () rs orientation: forward

Symbol	Name	Function Class
Gm33510	predicted gene, 33510	within coordinates
Gm48651	predicted gene, 48651	within coordinates