rs49052421 SNP Detail

Summary

• ID
  rs49052421
• Variation Type
  SNP
• Alleles
  T

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr9:32602349 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        AATGGATAAA GAAATCCACC ACTTCGTCTC TGCTTCTTCA
  TCTCCAGAGT GGGGCACGTC TTGTGGGTGG ACTGACTTGG CACTTAAAAA TGAAGGTGAG
  T
  GGTCATGGGG AGGGTGGAAA AGACTTCACA GAGAAATTAT TTGAGTGTAA AATTCAAGCC
  ATACCTACAG GAAAATCCTT TTTGAAGTTT GGAATTGTT                       
  
  T = T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	DBA/2J
ss136249556	ENSMUSSNP5456383	ENSEMBL	ENSEMBL_Sanger	f	SNP	T
SNP Consensus Information
SNP					Consensus Type	DBA/2J
rs49052421					SNP	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr9:32602349 () rs orientation: forward

Symbol	Name	Function Class
Ets1	E26 avian leukemia oncogene 1, 5' domain	within coordinates
Rr199954	regulatory region 199954	1052 bp proximal
Rr203547	regulatory region 203547	1746 bp proximal