rs49057097 SNP Detail

Summary

• ID
  rs49057097
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr15:86481251 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CTGCTAAGAT GGTTTCACTT
  AACAAAATGA AACAGCACCT GATCTATGAC ACAAATTCCC TAACTTTTTT CCAAGTTTCG
  GCTTAGTTTC TAAGTGTTTG ACACTAAGAT TAAAACAATT GTGGGGGGCC GGGGAGGGGG
  GCTAGGGAGA TGGCTCAGTG TGTAAGGTGC TTGGCATGCA AATGGGAGAA CCTGAGTTTG
  M
  ATCCAAAGCC CACAGGAAGC TAGCTAGATT ATATGGTCTG TGCTATCAAT GCTCCTGACG
  GAGAGATGGG AGGTAGAGAC GTCAGACTCT GGAGTCCCCA GGCCAGCTAG ACAGGCTACT
  ATAGTGCAAA CAAGAAAGGT CTGCCTCAGA CCAACCAAAG AGATTGTTCT CTGACCTTCA
  CATACACCCC CCCCAACACA                                            
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss63575837	NES17031697	PERLEGEN	MM_PANEL2	f	SNP	C	C	C	C	C	C	C	C	C	C	A	C	C	A	C
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs49057097					SNP	C	C	C	C	C	C	C	C	C	C	A	C	C	A	C

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss63575837	NES17031697	PERLEGEN	MM_PANEL	f	SNP	A/C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr15:86481251 () rs orientation: forward

Symbol	Name	Function Class
D15Mit37	DNA segment, Chr 15, Massachusetts Institute of Technology 37	170 bp proximal