rs49057318 SNP Detail

Summary

• ID
  rs49057318
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr14:52314630 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        TTCTC AAGAACAGGA AGAATAGGTA
  K
  CTAAGTGGTT GAGTTTGCTA GTTTA                                      
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
ss139500738	ENSMUSSNP5725354	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	G	T
ss324627161	CHEV_14_52696848	CHEVERUD	SCREENING_POP	f	SNP				G	T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
rs49057318					SNP	G	G	T	G	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr14:52314630 () rs orientation: forward

Symbol	Name	Function Class
Hnrnpc	heterogeneous nuclear ribonucleoprotein C	within coordinates
Rr289029	regulatory region 289029	1971 bp proximal
Tssr128488	transcription start site region 128488	857 bp downstream