rs49058645 SNP Detail

Summary

• ID
  rs49058645
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:83403053 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GCATTGAGTT TAAATATTAA
  ATATTCATGC TTACTCTATA ACTCCAAATT CATTCTAAAA TAATTCTTTT CAAATCTTAT
  AGGTATTGTT TGTTTTCTAC TCTTTTAATA TTTAATAAAA AATACCAACT GTGTAGCTAT
  GTATGTTCCC ACAGCATTGT GAACCTTGTG GGTTAGCCCA ACAGATATTA CTGATGTTTT
  R
  CCATTATTCC TTTTATGAAG CCTGCCATCC TTGCCACACC AGAGTAACTA TCATGCAGGC
  AGGCATCACA TCGACACAAG CATATTTTCT CTATACACTC GCCATTCAGC AGAGGGTAGC
  TTCATGGTTT ATAGAATTTT CAATTGGTAA AAGTAATTGT TCAGTGTTTC AGGCTGTGGT
  CTACTGGAGC AAAGGTACAA                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J	MSM/Ms
ss144833266	ENSMUSSNP731970	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	G	G	A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J	MSM/Ms
rs49058645					SNP	G	G	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:83403053 () rs orientation: forward

Symbol	Name	Function Class
Gm37989	predicted gene, 37989	1264 bp downstream
Gm69621	predicted gene, 69621	928 bp downstream