rs49059541 SNP Detail

Summary

• ID
  rs49059541
• Variation Type
  SNP
• Alleles
  A

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  ChrX:104813038 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TGTATCCCAG GCTGGCTTTG
  AATTACCTAT CTTCCTACCT CAGACTCCTG TGGATTAGCA GCACGGATAC ATGCCTCTAC
  ATCCAGATAA TGGCGACCAG TTTTACATTG GTTTTTTTGA AATTTTATTT TCGATTGTGT
  GGGTTGGGGA GGAAGGAGAA GCACCAGTGC TTGTGTGGAG ATGAGAGGAC AACTTTAGGC
  A
  GTCAGTTCTC GTCTTCCATC ATGTGAATCC CAAGGGATCA AACTCAGATT GGAGGCTAGG
  CAGCCATTGA CCTTATCCAC TGAGCCATCT TGCCAGTCCT AATTTACACT TTTTAAATTA
  CTTACATTTT ATTTCTTTAG TGTATGTGAG AGAGAGAGAG ATGAGGGGGG TGTTGGGAGA
  GAGAGATAGA GAATGAGGGG                                            
  
  A = A
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J
ss134261156	ENSMUSSNP940810	ENSEMBL	ENSEMBL_Sanger	f	SNP	A
SNP Consensus Information
SNP					Consensus Type	A/J
rs49059541					SNP	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: ChrX:104813038 () rs orientation: forward

Symbol	Name	Function Class
Fgf16	fibroblast growth factor 16	within coordinates