rs49064674 SNP Detail

Summary

• ID
  rs49064674
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr14:86987195 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        ACAAA GTGAGAAGTC CTTGAAACCC
  R
  TCTAGTGCTA ATAGTGTAAG TAAGA                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	BTBR T<+> Itpr3/J	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	LG/J	SM/J
ss62495643	NES17274110	PERLEGEN	MM_PANEL2	f	SNP	G			G	G		A	G
ss139889535	ENSMUSSNP687332	ENSEMBL	ENSEMBL_Sanger	f	SNP		G	A			A
ss324692382	CHEV_14_87149566	CHEVERUD	SCREENING_POP	f	SNP									G	A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	BTBR T<+> Itpr3/J	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	LG/J	SM/J
rs49064674					SNP	G	G	A	G	G	A	A	G	G	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss62495643	NES17274110	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr14:86987195 () rs orientation: forward

Symbol	Name	Function Class
Diaph3	diaphanous related formin 3	within coordinates
Rr297552	regulatory region 297552	394 bp distal
Tssr4496	transcription start site region 4496	641 bp upstream
Tssr129931	transcription start site region 129931	671 bp upstream