rs49065438 SNP Detail

Summary

• ID
  rs49065438
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr12:107866264 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        GTTCT ATGATCAACC ACCATTTGCA
  R
  ATGAGGGAGG CACAGAATGG TCACA                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	DBA/2J	LG/J	SM/J
ss138670916	ENSMUSSNP1454103	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	A
ss324151636	CHEV_12_109138215	CHEVERUD	SCREENING_POP	f	SNP			G	A
SNP Consensus Information
SNP					Consensus Type	A/J	DBA/2J	LG/J	SM/J
rs49065438					SNP	A	A	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr12:107866264 () rs orientation: forward

Symbol	Name	Function Class
4930440F04Rik	RIKEN cDNA 4930440F04 gene	104 bp downstream
Gm59523	predicted gene, 59523	1363 bp downstream