rs49070608 SNP Detail

Summary

• ID
  rs49070608
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:78182087 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        AGCTC ATAGTTAGGC TACTGTGCCT
  Y
  CCTTTACCTT CCCAGAAGGT TCTTA                                      
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss319802320	CHEV_1_78202025	CHEVERUD	SCREENING_POP	f	SNP	C	T
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs49070608					SNP	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:78182087 () rs orientation: forward

Symbol	Name	Function Class
Cpgi455	CpG island 455	1244 bp distal
D1Mit215	DNA segment, Chr 1, Massachusetts Institute of Technology 215	909 bp proximal
Rr370614	regulatory region 370614	1502 bp downstream