rs49071414 SNP Detail

Summary

• ID
  rs49071414
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr2:127543996 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        AGAAATGGTG GCACCAGACA GAGGGGAGAT AAAAGGAGGG
  TTTCTTTGCT CAACTGTAAA CAAAAGTAAA GAAATGGGAT GATGCAAAAT CAACTGTAAA
  Y
  GGAAGTAAAG AAATAAGATA ATGAAAAATC AAAATATTTG GGAAGAATGG CAAGTGAAGA
  AAGCAGTTCA GATGGTGGAG GTGATTAATT TTATGCTGT                       
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	DBA/2J
ss147538453	ENSMUSSNP1229680	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	T
SNP Consensus Information
SNP					Consensus Type	A/J	DBA/2J
rs49071414					SNP	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:127543996 () rs orientation: forward

Symbol	Name	Function Class
D2Dcr72	DNA Segment, Chr 2, Derry C. Roopenian 72	432 bp proximal
Gm10765	predicted gene 10765	within coordinates
Tssr20034	transcription start site region 20034	337 bp upstream