rs49072573 SNP Detail

Summary

• ID
  rs49072573
• Variation Type
  SNP
• Alleles
  T

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr8:84470495 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        TCCTGGCCTT ACACTAAACC ATTTCTTCCC ATTTTCTTTT
  TTTTTTTTTT AAGATTTATT TATTTATTAT ATGTAAGTAC ACTGTAGCTG TCTTCAGACA
  T
  ACCAGAAGAG GGAGTCAGAT CTCATTACAG ATGGTTGTGA GCCACCATAT GGTTGCTGGG
  ATTTGAACTC TGGACCTTCG GAAGAGCAGT CAGGTGCTC                       
  
  T = T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	DBA/2J
ss145361211	ENSMUSSNP4378704	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	T
SNP Consensus Information
SNP					Consensus Type	A/J	DBA/2J
rs49072573					SNP	T	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr8:84470495 () rs orientation: forward

Symbol	Name	Function Class
Gm46046	predicted gene, 46046	within coordinates
Rr666303	regulatory region 666303	1687 bp distal
Rr666304	regulatory region 666304	1050 bp distal
Tssr2621	transcription start site region 2621	1301 bp downstream