rs49075631 SNP Detail

Summary

• ID
  rs49075631
• Variation Type
  SNP
• Alleles
  T

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr16:93788573 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        CATGG TGACGGTGAA GGAAGCTGAG
  T
  CAGTGTCTTT GACAGTCCCT GGAGT                                      
  
  T = T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	DBA/2J	LG/J	SM/J
ss148576362	ENSMUSSNP737127	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	T
ss325280715	CHEV_16_93991930	CHEVERUD	SCREENING_POP	f	SNP			T	T
SNP Consensus Information
SNP					Consensus Type	A/J	DBA/2J	LG/J	SM/J
rs49075631					SNP	T	T	T	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr16:93788573 () rs orientation: forward

Symbol	Name	Function Class
Cldn14	claudin 14	within coordinates
Rr324727	regulatory region 324727	1850 bp proximal