rs49079001 SNP Detail

Summary

• ID
  rs49079001
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr15:57547743 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              ACCATAACAC TCAATTATGG
  CTTCTTTGGC TCAAACTTGG GCAGGACACA GTGGGCATGC CTTGGCTCTG CTCTGCAAAG
  TCTTGTCCAT CCATTAATTA AGACCCAGTA CCCAGAAGTG ACTCAGCAAC CAGACAGCTG
  GAGTCACCAT CACTTCCCAT AGTTGATGAC AGTGACAGGA TGGGACCCAG CTGGGGCTGC
  Y
  GACTCTTGCA CCTGTATGGA ACCTCTCCCT GCTTGCAGAG GTGACCTCAC AGTACTGCAT
  CCTCCAGTGA GTCACACTCC TTACACAATG GCTGCAGACA CTAGACCCTA GTTGTCTCAC
  TATGCAAGCT GCTCCTTCTT AGTCTTGGAA TTCACATAGA ATTATTTCTG CCACAGACTG
  ATGGTCAAAG CGCTTGTCAA                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	DBA/2J	MSM/Ms
ss147978617	ENSMUSSNP2608920	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	C	T
SNP Consensus Information
SNP					Consensus Type	A/J	DBA/2J	MSM/Ms
rs49079001					SNP	C	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr15:57547743 () rs orientation: forward

Symbol	Name	Function Class
D15Dcr1	DNA Segment, Chr 15, Derry C. Roopenian 1	518 bp proximal