rs49085394 SNP Detail

Summary

• ID
  rs49085394
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:149416920 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TTTTTCTTTT CTTCCTTCCT
  TCTTTTTTTT TTTTAAAGAT TTATTTATTG AGCCGGGCGT GGTGGCATAC GCCTTTAATC
  CCAGCACTCC GGGAGGCAGA GGCAGGCAGA TTTCTGAGTT CAAGGCCAGC CTGGTCTACA
  AAGTGAGTTC CAGGACTGCT AGGGCTATAC AGAGAAACCC TGTCTCAAAA AACCAAAAAA
  M
  CCAACCAACA AACAAAAAAA ACCCCAAAGA TTTATTTACT ATGTAAGTAC ACCGTAGCTG
  TTTTCAGACA CACCAGAAGA GGGCATCAGA TCGCATTATG GATGGCTGTG AGCCACCATG
  TTGCTGGGGT TTGAACTCAG GACCTTCAGA AAAGCAGTCA GCGCTCTTAC CTGCTGAGCC
  ATCTCTCCAG CCCCCAGTCA                                            
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J
ss148031418	ENSMUSSNP743229	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	A	C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J
rs49085394					SNP	A	A	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:149416920 () rs orientation: forward

Symbol	Name	Function Class
Rr604892	regulatory region 604892	1761 bp distal
Ube4b	ubiquitination factor E4B	within coordinates