rs49086456 SNP Detail

Summary

• ID
  rs49086456
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr2:44372031 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CCTTTGCTGT TGTGTTCCTT
  TTATGTTGGT TTCACTGATA AATACATGAT AGACAGACAG ATGGATGATA GATAGATAGA
  TAGATAGATA GATAGATAGA TAGATAGATA GTGACCTAAC CATTTAGTGT TATATAACCA
  ATTGGTATTC CCTTTTTTAA GAAAGACTAT TTCTCCTACC TAGCATTTCT TTTATTGCCT
  R
  TAGTTCTTTG CCTAGAGTTG AGCCTCATAT AACAAATTTT CTTACCCCAC CATCTGTTAG
  TACCTAGTTA TTATCAATAG GTACTCATAA ATATTTGATG AAGAACAACT TCCTAAAATG
  TCCTTTGCAC TTCACATGAT TTTGTAATAA TAAAACATAT AAAAAGGAAA ATTCTCTTAC
  TTCTTTCCTT GATTCTCATT                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J	MSM/Ms
ss146482740	ENSMUSSNP4996037	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	G	G	A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J	MSM/Ms
rs49086456					SNP	G	G	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:44372031 () rs orientation: forward

Symbol	Name	Function Class
Gm74735	predicted gene, 74735	within coordinates
Rr373113	regulatory region 373113	740 bp upstream