rs49086683 SNP Detail

Summary

• ID
  rs49086683
• Variation Type
  SNP
• Alleles
  G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr17:24657068 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        AGGGT TTCTCTGTGT AGCCCTGGCT
  G
  TCCTAGAACT CACTCTGTAG ACCAG                                      
  
  G = G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	LG/J	SM/J
ss145355198	ENSMUSSNP5774354	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	G
ss325331686	CHEV_17_24575039	CHEVERUD	SCREENING_POP	f	SNP			G	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	LG/J	SM/J
rs49086683					SNP	G	G	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr17:24657068 () rs orientation: forward

Symbol	Name	Function Class
Dnase1l2	deoxyribonuclease 1-like 2	1986 bp downstream
Eci1	enoyl-Coenzyme A delta isomerase 1	within coordinates
Rr329767	regulatory region 329767	268 bp distal
Rr329768	regulatory region 329768	1333 bp proximal
Rr337043	regulatory region 337043	1308 bp proximal
Rr340708	regulatory region 340708	1868 bp distal
Rr340709	regulatory region 340709	484 bp distal