About   Help   FAQ
rs49111070 SNP Detail
Summary
  • ID
    rs49111070
  • Variation Type
    SNP
  • Alleles
    A/G
Genome Location and Flanking Sequence
  • Location
    Chr11:101198273 (GRCm39)
  • SNP Orientation to the Genome
    forward
  • SNP Reference Flanking Sequence
                          GAGAGCTTCT AAGTCTGAGT GCAGTCAAAA ATAAATCTTA
    AAGAGCCAGG CGTTGGTGGC GCACACCTTT AATCCCAGCA CTCAGGAGGC AGAGGCAGGT
    R
    GATTTCTGAG TTCCAGGCCA GCTAGGGCTA TCCAGAGAAA CTCTGTCTGG AAAACAAAAC
    AAAAAAGTCT TAAAGAATGA CTGGTGATTG GGTCCTTGC                       
    
    R = A/G
    

    Note: Sequence in lower case indicates low-complexity or repetitive sequence
    BLAST SNP flanking sequence against the mouse Genome
SNP Assays
and
SNP Consensus
Strain alleles of submitted assays, and consensus values for this SNP
Legend
Assay ID Submitter
SNP ID
Submitter
Handle
Population
ss orientation
Variation Type
129X1/SvJ
A/J
DBA/2J
ss132726813 ENSMUSSNP4242969 ENSEMBL ENSEMBL_Sanger f SNP G A G
SNP Consensus Information
SNP Consensus Type
129X1/SvJ
A/J
DBA/2J
rs49111070 SNP G A G
Gene/Marker
Associations
and
Function
Classes
MGI genes/markers associated with the SNP
Location: Chr11:101198273 () rs orientation: forward
Symbol Name Transcript Protein Function
Class
Allele Residue Codon
Position
AA
Position
Gm11617 predicted gene 11617 67 bp downstream

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
Warranty Disclaimer, Privacy Notice, Licensing, & Copyright
Send questions and comments to User Support.
last database update
12/17/2024
MGI 6.24
The Jackson Laboratory