rs49118679 SNP Detail

Summary

• ID
  rs49118679
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:39768855 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        GAGAA GGATTCTAAA ATATCACACT
  R
  GGCTGCAAAA CCGGCTCAGC ATTTA                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss320726065	CHEV_3_39613628	CHEVERUD	SCREENING_POP	f	SNP	A	G
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs49118679					SNP	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:39768855 () rs orientation: forward

Symbol	Name	Function Class
Gm46834	predicted gene, 46834	within coordinates
Rr575767	regulatory region 575767	1466 bp distal
Rr575768	regulatory region 575768	1002 bp distal
Rr575769	regulatory region 575769	208 bp distal