rs49124438 SNP Detail

Summary

• ID
  rs49124438
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  132
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr12:76376363 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                      G GACAGGCAGA GAAAGTCACA GTGGATCATG CAGAGGAAGC
  CACAGTGGGT CAGGCAGAGG AAGCTACAGT TGGACAGGCA GAGAAAGTCA CAGTGGATCA
  K
  GCAGAGGAAG CCACAGTGGG TCAGGCAGAG GAAGCTACAG TTGGACAGGC AGAGAAAGTC
  ACAGTGGATC AGGCAGAGGA ACCCACAGTG GATCAGGCTG A                    
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J
ss137906159	ENSMUSSNP3847827	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	T	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J
rs49124438					SNP	T	T	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr12:76376363 () rs orientation: forward

Symbol	Name	Function Class
Akap5	A kinase anchor protein 5	Coding-NonSynonymous
Tssr113950	transcription start site region 113950	644 bp downstream
Tssr113951	transcription start site region 113951	519 bp downstream
Tssr113952	transcription start site region 113952	306 bp downstream