rs49131258 SNP Detail

Summary

• ID
  rs49131258
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr9:77836868 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AACTACTATG CTTCTCTCAA
  GGCAGAGCAG AAATGCAGAG CAGAAATGCA GTCTGTAGTG GACAGCAGCA CTTAGGCTGA
  GCTCTGAGGT GTTTCAGCCG GCATTGGCTG GGGTAAGGCA GGTTGCCGTA GGCAGTGCAG
  TGTTCATACG TGAGGGGGCA GGGGGCAGGG GCTCAGGCAG ACATGCCTTG GGTTCATTAC
  R
  TGTTTGATGT GGAATTAATT TTTGGTCATT GTGCATTCAA GACTCTTTTA CTGTTCCCAG
  CTTTGCATGT TGCTTTTTTC ATGATTTCCA GTAACGTGAC CTCTAGTTTA AAAAGTTGGG
  TCATGGAAAA ACCTTAAGGA AAACCATAGA AAAACCTTGG TATGCGTCAG TCCCTTGACG
  TGTCTTGACT ACAGTAGAGA                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J
ss136662676	ENSMUSSNP3443850	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	G	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J
rs49131258					SNP	A	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr9:77836868 () rs orientation: forward

Symbol	Name	Function Class
Elovl5	ELOVL fatty acid elongase 5	Intron
Rr401538	regulatory region 401538	1279 bp upstream
Rr683432	regulatory region 683432	554 bp proximal
Rr683433	regulatory region 683433	1265 bp proximal