rs49136502 SNP Detail

Summary

• ID
  rs49136502
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  132
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr12:98589986 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                      G TGCCGAAATA GTAAAAATTG AACCTTGAGC AGAGAGCTTT
  GTCTTGGTTC CTTCCTTATC TCGCGCAGCC CAGCCCCTCT TCTCCTCCAG GTTTCCAAAA
  Y
  GCCTTTCCAG GCTAGAACCC AGGTTGTGAT CTACTGGCCA GACACAACAA TTTCTAATTT
  CAAGGCCAGA CTGGTCTACA AATTGAGTTC CAGGACAGCC A                    
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	MSM/Ms
ss137986000	ENSMUSSNP648224	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	T	C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	MSM/Ms
rs49136502					SNP	T	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr12:98589986 () rs orientation: forward

Symbol	Name	Function Class
Rr387680	regulatory region 387680	within coordinates