rs49141990 SNP Detail

Summary

• ID
  rs49141990
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr2:156034498 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        GGGCA GTGGTGCACA CCTTTAATCA
  M
  AGCACTTGGG AGGCACAGGC ACCAC                                      
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	LG/J	SM/J
ss148068197	ENSMUSSNP2546189	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	A
ss320578132	CHEV_2_156018314	CHEVERUD	SCREENING_POP	f	SNP			A	C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	LG/J	SM/J
rs49141990					SNP	C	A	A	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:156034498 () rs orientation: forward

Symbol	Name	Function Class
Gm75148	predicted gene, 75148	1474 bp downstream
Rr374121	regulatory region 374121	1889 bp upstream
Rr568205	regulatory region 568205	1557 bp distal
Rr568206	regulatory region 568206	1059 bp distal
Rr568207	regulatory region 568207	846 bp distal