rs49146387 SNP Detail

Summary

• ID
  rs49146387
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:23347023 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        GACCT GGGGAGAGTT ACAGGTTTGC
  R
  GTTGGTAAAT AAGATAAAAA TAAAT                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J
ss148754269	ENSMUSSNP3978208	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	G	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J
rs49146387					SNP	A	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:23347023 () rs orientation: forward

Symbol	Name	Function Class
Gm70599	predicted gene, 70599	1637 bp downstream
Rr15559	regulatory region 15559	1823 bp distal
Rr33139	regulatory region 33139	1423 bp distal
Rr370991	regulatory region 370991	175 bp downstream