rs49146505 SNP Detail

Summary

• ID
  rs49146505
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr7:61696289 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        GCTGCAGCAG GCAGGAACAG TGAAATGAGA AATAATAAAT
  AAATGCAATT TTACATGGTT CCACTTGACA AAAGGCAAAA ACAGCCAGTG GTGTGTGGGG
  R
  CTCTGAGCAT GTATCTGGTT GCTTGGGAAT AGATGCTCTT GTAAAAGGAA GTGTCTTTGT
  CTGTCTGGAC CCTTCTGATT ATGATTTTGA GCTGCCAGA                       
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J
ss144765170	ENSMUSSNP204378	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	G	A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J
rs49146505					SNP	A	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr7:61696289 () rs orientation: forward

Symbol	Name	Function Class
Gm72932	predicted gene, 72932	within coordinates
Mir344f	microRNA Mir344f	293 bp upstream
Rr647584	regulatory region 647584	within coordinates
Tssr72743	transcription start site region 72743	291 bp upstream