rs49146679 SNP Detail

Summary

• ID
  rs49146679
• Variation Type
  SNP
• Alleles
  T

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr17:75828338 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GTGGAGAGAG GGGGAAGGGG
  GGGGGCAAGC AGCCCCTTTT ATAGTGAGTC AGGCCTACCT GACTGTTGCC AGGTAACTGT
  GGGGTGGAGT TTAGATAGAA CGCTAACAGT CATCTTCACC TCTTACATGA CAGAAGCCAG
  CTAGATGATT TAAAATTTCA CAGACTCTTG AGAAGGTATA ATTAACCTGA TTGCCCACTT
  T
  CCCTTTCTGC CCCCATTTAG TCTTTAGTGG TCCTGAGCTA ACCTATCAGT GGTGTGAAGA
  CATCTTTACT GCCCAGAGGC AAACTGTGAT GCCGCCAGAA GGCATTTGCA TCTTAATGTG
  TACTGAAAGA CCTAAGGACT GTAAAGGATC AAAAGAATCT CTGGGGTCCC CTGATGGGAT
  TTCTTTGTTT GCATGAGAGG                                            
  
  T = T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J
ss145965548	ENSMUSSNP1826444	ENSEMBL	ENSEMBL_Sanger	f	SNP	T
SNP Consensus Information
SNP					Consensus Type	A/J
rs49146679					SNP	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr17:75828338 () rs orientation: forward

Symbol	Name	Function Class
Rasgrp3	RAS, guanyl releasing protein 3	within coordinates
Rr531054	regulatory region 531054	1346 bp proximal
Tssr145886	transcription start site region 145886	716 bp downstream