rs49147918 SNP Detail

Summary

• ID
  rs49147918
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr16:19228809 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TTATCACTAT TTCTATTGTT
  ATTATGTCCT GAATTGATAA CCAACTCAAA ACAATATATA TACTTTTATA TTTATAATCT
  TGTCAGTAAA CGTTATCATT GCTGTGTAGA AAAATATCTG TAATACATTA TATCTAGTTC
  TTGTTTTCAA AGCTATTCTT TATATGTCAG TGTCTTTACT TATGATCATT TGAATAATTA
  R
  TAACGAAAAA TTCCTGAAAA TAATGAAAAT CAGATTCCAT GGAACTAGAG TTACAGGTAA
  TTGTGAGCTG TCATGTAGGT CCTAGAAATG GAACCTGAGT CCACTAGAAG AGCAGGTAAG
  GGTCTCACCC ACTAAGCCAT CTCTCCAGCC CTTTTTAAAA AAATAATATT TCAATTAATT
  TTTCAGATTT TTGTACAATG                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss63674935	NES17060082	PERLEGEN	MM_PANEL2	f	SNP	G	G	G	G	G	G	A	G	G	G	G	G	G	G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs49147918					SNP	G	G	G	G	G	G	A	G	G	G	G	G	G	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss63674935	NES17060082	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr16:19228809 () rs orientation: forward

Symbol	Name	Function Class
Gm25762	predicted gene, 25762	1099 bp upstream
Or2m13	olfactory receptor family 2 subfamily M member 13	within coordinates