rs49150456 SNP Detail

Summary

• ID
  rs49150456
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr14:106093853 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CCAGTCACCT CTCTTCTGCG
  GCATAACACT TTTTCTTTGA GAAGCTCTGT GAGGCAGAGT CTGGCTAGGA TGCAAATTGT
  TTCATTCTTC ACAGAACATG CAGAGACATT CACTCTGGCT CTTATACATG GTACAGTTAA
  CATAAAGATG CAGTCCTTCA TGGGTAAGCT CTCCTCTTAC AGACAGAGAC ACGCAGACCC
  R
  TCACCAAGTC ATCATGTTAG CTTATCATTT CATTTATTCC AATAGTGTTA CCAGCTAATT
  TGGGTGTTTC ATGGCCACAT CAAATTCATC TCTGCACATT TGGTGTCCCC AACAAGATAG
  GTTCGCAGTG GCTGCACATA GAAACTTCTT TCTACTTTTA CAGTGATGCA AAACAGATAA
  TGGAGGCTTC GCAGTCCAGT                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss62559024	NES17102183	PERLEGEN	MM_PANEL2	f	SNP	G	G	G	G	G	G	A	G	G	G	G	G	G	G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs49150456					SNP	G	G	G	G	G	G	A	G	G	G	G	G	G	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss62559024	NES17102183	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr14:106093853 () rs orientation: forward

Symbol	Name	Function Class
Gm48970	predicted gene, 48970	within coordinates
Gm63380	predicted gene, 63380	1218 bp downstream
Rr390111	regulatory region 390111	1797 bp upstream