rs49155005 SNP Detail

Summary

• ID
  rs49155005
• Variation Type
  SNP
• Alleles
  C

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr14:52315134 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        GCAGA GGCAGGCGGA TTTCTGAATT
  C
  GAAGCCAGCC TGGTCTACAG AGTGA                                      
  
  C = C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	DBA/2J
ss139500741	ENSMUSSNP4476188	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	C
SNP Consensus Information
SNP					Consensus Type	A/J	DBA/2J
rs49155005					SNP	C	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr14:52315134 () rs orientation: forward

Symbol	Name	Function Class
Hnrnpc	heterogeneous nuclear ribonucleoprotein C	Intron
Rr491873	regulatory region 491873	1569 bp proximal
Rr491874	regulatory region 491874	1949 bp proximal
Tssr128488	transcription start site region 128488	353 bp downstream
Tssr128489	transcription start site region 128489	1849 bp downstream