rs49155396 SNP Detail

Summary

• ID
  rs49155396
• Variation Type
  SNP
• Alleles
  G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:107342343 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GGGCTACATG TTGCCTCCTG
  ATCATTAATT AATGAAGCCA AGAGGTCCCT TCCCCAGTGT GTGTGTGTGT GTGTGTGTGT
  GTGTGTGTGT GTGTGTGTTT ACACAGACAT GAGACTTCTG CTTTTCTTAT CTTGCTAAAG
  GTATCAATTT CGATTAAGGA AGTGAAAAGC ATTAAAAGCG CCGGGGGGGT GGGCGGGGGG
  G
  GGGTACCTCC TAAGTTTTAT TCCGTTTTGA TGCTGTCCAG GCTTGGACCC ATAGAGCAGT
  ACAGTTGGGC CTGAATCTCA GCTTCACCTC TTTCAGGACT GTGACTTTGA AAGTATGAAC
  TTACATGTCA CGCTGCATTT TTTTCTCTGT GGAGCAAACT GTTACACCAG TCTCAGAATG
  CCCTTCCATG AGCACTGCAC                                            
  
  G = G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	DBA/2J
ss135583978	ENSMUSSNP709	ENSEMBL	ENSEMBL_Sanger	f	SNP	G
SNP Consensus Information
SNP					Consensus Type	DBA/2J
rs49155396					SNP	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:107342343 () rs orientation: forward

Symbol	Name	Function Class
Rr582971	regulatory region 582971	933 bp distal
Rr582972	regulatory region 582972	902 bp distal
Rr582973	regulatory region 582973	1438 bp proximal