rs49159255 SNP Detail

Summary

• ID
  rs49159255
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr1:164147138 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        GATCAATTTA GAGTCTTGCC TTGAGTAGCT CAAAAAAAAA
  AAAGATCATA GTAAAAGCCC GAATATAAAA CCTCAAATCG GAAATCTCTT ACAATGAAGC
  R
  TAGGTCTACA GCTCTGCAGT ATTGTGTCAA GCAAAGCTTT CTCGAATATG ACATCAAAAC
  CACAAGTCAC CACCATTCCC GTCCCCTTGC CGGTGAAGT                       
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J
ss145976356	ENSMUSSNP3167945	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	G	A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J
rs49159255					SNP	G	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:164147138 () rs orientation: forward

Symbol	Name	Transcript	Protein	Function Class	Allele	Residue	Codon Position	AA Position
Nme7	NME/NM23 family member 7			Intron
				Noncoding-Transcript-Variant
Rr422185	regulatory region 422185			106 bp proximal
Rr422186	regulatory region 422186			1173 bp proximal
Rr422187	regulatory region 422187			1725 bp proximal