rs49166030 SNP Detail

Summary

• ID
  rs49166030
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr7:116588562 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              ACATGTATAT ATAATGCAAT
  GTGTTCACAC CCCCATTGCC CTCTTTTGTC CCCTCCCACA CCTGCGGATC CCTTTTCTTT
  TCCAAGTTTG TACTCCTTGA ACTTTCATGC CTTTTTTGCA ACCCCATGGT TTTAATTAGA
  GTTACTTACA GGAAGACAGG TAAAGCATAT GGGCAACTTA CCAGTGGCTA CACCAGGGAA
  R
  AACATCTTTG TCTTAGCAAC CATTAACTAT AAATCCTCAG GAATGGGTGG GACCCTGGGT
  GAATTCTTGA TGTTTCTTGA CTCCCTACAA AAGGAGAGCT ACCTGGACAT TCAAAGCTAC
  ACGCTTTAGA TGTGAAGGCT TTTCAACCAT TTCTGCATGT TGGTAGCAAA TGAGTTCTCT
  TGGACACTTG CTCGTCTTTA                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J	MSM/Ms
ss145742518	ENSMUSSNP6660961	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	A	A	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J	MSM/Ms
rs49166030					SNP	G	A	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr7:116588562 () rs orientation: forward

Symbol	Name	Function Class
Rr381374	regulatory region 381374	1426 bp upstream