rs49166174 SNP Detail

Summary

• ID
  rs49166174
• Variation Type
  SNP
• Alleles
  A

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  132
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr8:124773826 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                      C TTTGTCTTAG CGAGTCTCAA GGCCAGGGTT CTGGCTTCGC
  CAATTTCATG CTGCTGGCTA AGCTTCAGGG TTTTTAGCAT ATTGCCTGGG TTTGCTGAGA
  A
  CCCTCCTTCC TTCCTTGCCA GGTAACCTTG TACCCACCTG TGAAGAACCT GCTTCAGGAG
  GGGATTTATC TCATCTTGGA TCTTTGCATG GAGCGGGATA T                    
  
  A = A
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	DBA/2J
ss145838762	ENSMUSSNP1291081	ENSEMBL	ENSEMBL_Sanger	f	SNP	A
SNP Consensus Information
SNP					Consensus Type	DBA/2J
rs49166174					SNP	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr8:124773826 () rs orientation: forward

Symbol	Name	Function Class
Gm45732	predicted gene 45732	within coordinates
Rr672609	regulatory region 672609	942 bp distal
Tssr80016	transcription start site region 80016	58 bp upstream
Tssr80017	transcription start site region 80017	520 bp upstream
Urb2	URB2 ribosome biogenesis 2 homolog (S. cerevisiae)	within coordinates