rs49167559 SNP Detail

Summary

• ID
  rs49167559
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr11:71781104 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        GTGACCTAGA CAAACATACC TGTCTCACAG CTCTATAGGT
  GCGAAGTCGG AAGTGGAAGT GCCAGTGTCG GGAGCTACTC CTGAGGGCTG AGACTGAGGG
  R
  TTTGTTTTGA GCCTCTCTTT GCTGACCTCC TTATGTCTCA TTTAATTTTA ATTTTGCATT
  TAATTTTTTG TCTGCGCATA TATCTATGTA CCACATGCA                       
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J
ss132396249	ENSMUSSNP5588074	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	A	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J
rs49167559					SNP	A	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr11:71781104 () rs orientation: forward

Symbol	Name	Function Class
Gm46285	predicted gene, 46285	1402 bp upstream