rs49172545 SNP Detail

Summary

• ID
  rs49172545
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  127
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr10:118690088 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        AAACGCAATA CAATCACACC TCTTCCAGTC CTTACCACAG
  CCAGCTAACA CTTCAGAAGA ACCACCACTC ATTCTTGATT TACTAAACTT CCGAGACTCA
  R
  AAAAATCGGC CATTCCCGTC TCCCTCGCAG TTAATGAGGA TGCAACCACG GCCGATCCGT
  TAAGTCGAAG AGGAAAGCAA ATAAACCAAG CACTTGGCAT                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	CAST/EiJ	NZW/LacJ	PWD/PhJ
ss61322041	NES16929495	PERLEGEN	MM_PANEL2	f	SNP	A	G	A
SNP Consensus Information
SNP					Consensus Type	CAST/EiJ	NZW/LacJ	PWD/PhJ
rs49172545					SNP	A	G	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss61322041	NES16929495	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr10:118690088 () rs orientation: forward

Symbol	Name	Function Class
Dyrk2	dual-specificity tyrosine phosphorylation regulated kinase 2	1420 bp downstream
Gm67702	predicted gene, 67702	within coordinates
Rr226050	regulatory region 226050	1288 bp distal
Rr226051	regulatory region 226051	within coordinates
Tssr99504	transcription start site region 99504	1681 bp downstream