rs49189922 SNP Detail

Summary

• ID
  rs49189922
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:9931375 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        GAAAC AGATGAATCA AGATGGTGAT
  S
  CTTTGAGATA GGTCTTTTCA GCAAG                                      
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
ss134577970	ENSMUSSNP2455195	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	C	G
ss320652256	CHEV_3_9866315	CHEVERUD	SCREENING_POP	f	SNP				G	C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
rs49189922					SNP	G	C	G	G	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:9931375 () rs orientation: forward

Symbol	Name	Function Class
Gm56771	predicted gene, 56771	within coordinates
Rr367411	regulatory region 367411	223 bp downstream
Rr573525	regulatory region 573525	136 bp distal