rs49196761 SNP Detail

Summary

• ID
  rs49196761
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr14:74922673 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        GTCTG CAAACCCCCT CAGCTCCTTC
  W
  GTCCCTTCTC CAACTCCTCC ATTGG                                      
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	LG/J	MSM/Ms	SM/J
ss139745429	ENSMUSSNP6760540	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	T		A
ss324672018	CHEV_14_75085040	CHEVERUD	SCREENING_POP	f	SNP			A		A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	LG/J	MSM/Ms	SM/J
rs49196761					SNP	T	T	A	A	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr14:74922673 () rs orientation: forward

Symbol	Name	Function Class
Htr2a	5-hydroxytryptamine (serotonin) receptor 2A	within coordinates
Tssr126578	transcription start site region 126578	1625 bp downstream