rs49206739 SNP Detail

Summary

• ID
  rs49206739
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr7:102548862 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AGAGCTGAGT TCATTTTCAA
  ATCTCTGTGG TAGACCCCTT AAAAGTCACA TAACCTGTGC CATAATGACA ATAGATGATG
  AATTCATTGA AAAATATTGT CAATACTAAC AGATTTCTTC AGTTGTCTGG GTCTACTTTG
  ACTCTGTTCA TATACAACTA TGGTCTGTGT GAACACATGT ATGCTTCAGG GAACTCTTCC
  R
  TGCTTCAAAA TTTTATATTT AATTTACTTA TTCTGTATCT TAAAACATGT AGTTTGAGGT
  GCTGGGAAGA TGGCTCTGTC ACTAATGTTC TTTCTGTGAA AATGTAAGGA CCTAAATTCA
  TTTCTCCCGT CTGCATTTAT AAAAGCTGGG CATGGAGGTG TGTGTCTGAG GACTGAGGAG
  GAGAAAAGAA AAGATTCCCG                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	NOD/ShiLtJ	NZW/LacJ
ss61042889	NES16081814	PERLEGEN	MM_PANEL2	f	SNP	G	G	G	G	G	G	G	G	G	A	A	G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	NOD/ShiLtJ	NZW/LacJ
rs49206739					SNP	G	G	G	G	G	G	G	G	G	A	A	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss61042889	NES16081814	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr7:102548862 () rs orientation: forward

Symbol	Name	Function Class
Or51a8	olfactory receptor family 51 subfamily A member 8	687 bp upstream