rs49210642 SNP Detail

Summary

• ID
  rs49210642
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:143971995 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CATTGGTTTT AGTTGAGGCA
  GAGAGTCTCA TCCTGTGTAG GACAGGAAGC TACCAGCAGC TTCAAGTGTA CAAGGACCTT
  TTTTTACCAA GGAAACCTAG AAAAACAGAT ACCCTTGTGG TTCCCAGAGA GCATTCAATT
  CCTCAAAAGG ACTCTTAAGA TCTTCTTGGG TCACTTGTTG ACTACAGGGC CTCGTTATTT
  R
  ATTGACAGCC CTACTAGAGT CTCAAGGAAT GTGAGAAGGG CAGATCACAA AGGAAAAGAC
  CTTTTACCAG AATTTTTAAA AAAAGAAAGA AAAACAGAGG CACCCTATCT TTGAACCTAA
  ATCAGTAGCA GAAACTGTTG GAACTCATTA GCATCCCTTA TCTCAACAGT GAGATCGCAC
  CTAGCTTCCC CTTTGCTCCA                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	DBA/2J	MSM/Ms
ss136029574	ENSMUSSNP7074761	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	G	A
SNP Consensus Information
SNP					Consensus Type	A/J	DBA/2J	MSM/Ms
rs49210642					SNP	G	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:143971995 () rs orientation: forward

Symbol	Name	Function Class
Rr74711	regulatory region 74711	1236 bp distal
Rr74712	regulatory region 74712	480 bp proximal