rs49213047 SNP Detail

Summary

• ID
  rs49213047
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr7:27798676 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        TGGGC ACCTAAGCTG ACCCCATCAC
  Y
  TGGCTACTTC GAGCAGTGAA CAGCA                                      
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	DBA/2J	LG/J	SM/J
ss148631721	ENSMUSSNP3586209	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	C
ss322125331	CHEV_7_28884270	CHEVERUD	SCREENING_POP	f	SNP			T	T
SNP Consensus Information
SNP					Consensus Type	A/J	DBA/2J	LG/J	SM/J
rs49213047					SNP	T	C	T	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr7:27798676 () rs orientation: forward

Symbol	Name	Function Class
Fcgbp	Fc fragment of IgG binding protein	within coordinates
Gm10935	predicted gene 10935	409 bp downstream
Gm21925	predicted gene, 21925	within coordinates
Rr155708	regulatory region 155708	1325 bp proximal
Rr164628	regulatory region 164628	1283 bp distal
Rr170288	regulatory region 170288	1239 bp proximal