rs49222556 SNP Detail

Summary

• ID
  rs49222556
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  ChrX:111860860 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AGATGAAACC ATATTTCCTT
  CACCAACTTC ATTTTTAAAA AAATGGTGCC CTGACCTTCA AAAAAAGGCT TACTTTCACC
  CACTTCAGCA AAGACTAGCT TGTAAACCAA GACATTGGCT CATTACTATA TATAATGATA
  GCTACACTTC ACAAATAGAG CACAATCATT TATCGATCCA ACCCACTCTC TCCTTGCTGG
  Y
  AAATCAAAAC ATGATCAGAA GTTTGTTTGG CAAGTTCAGA CAAAATAGAA TGATCTGTGT
  GATTTGGCTG ACTAGTAATC TCAAAAGCTG TGTCTACACT TTGCCAGATC ACAAAATGCA
  AATGAGCTAT CCATGATTCA TTATTCAGTA CCACACTCCA TGAAATGAGG ATAACAATAA
  GTGCCTACTA CTGCACTAGA                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	LG/J	SM/J
ss134277767	ENSMUSSNP6331751	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	T
ss325913358	CHEV_X_110064772	CHEVERUD	SCREENING_POP	f	SNP			T	C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	LG/J	SM/J
rs49222556					SNP	T	T	T	C