rs49227317 SNP Detail

Summary

• ID
  rs49227317
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr9:32387421 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        GGGCT GCCTGACAAT GGGTTGGTTC
  R
  TGTGCTCTTT ATCCCTGAGT TCCCC                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
ss136246239	ENSMUSSNP3239830	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	G	A
ss322891908	CHEV_9_32283710	CHEVERUD	SCREENING_POP	f	SNP				A	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
rs49227317					SNP	G	G	A	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr9:32387421 () rs orientation: forward

Symbol	Name	Function Class
Fli1	Friend leukemia integration 1	within coordinates
Gm38292	predicted gene, 38292	1208 bp downstream