rs49230487 SNP Detail

Summary

• ID
  rs49230487
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr17:7260959 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        GTAGG ATTCCTGTCT GTTTCATAAG
  R
  TACAAACAAG GTACCATAGA CCGTA                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J	MSM/Ms
ss145100542	ENSMUSSNP5410854	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	G	G	A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J	MSM/Ms
rs49230487					SNP	A	G	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr17:7260959 () rs orientation: forward

Symbol	Name	Function Class
Gm49721	predicted gene, 49721	within coordinates
Rnaset2b	ribonuclease T2B	within coordinates
Tssr146343	transcription start site region 146343	295 bp upstream