rs49231013 SNP Detail

Summary

• ID
  rs49231013
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  132
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr17:48916725 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                      A AGATGAAGGA GGGTTAGGTG CAAGAGACTG ATGAGCAGAC
  GCTTTTACAG GTAACAGTTT CTAGATGATT CACGCTGACC TCGAAAAACA ACAGCTGGCC
  R
  TGCTGGTGCA CCCCTGCAAT CCAGAGGCTG AGGCAGGGGC ATCATGAGTT CCAGGTGAGT
  TTGGGCTAAT AGTGAATTCC AGGTCATCCT GAGCTGGACA G                    
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	MSM/Ms
ss145720313	ENSMUSSNP5340093	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	G	A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	MSM/Ms
rs49231013					SNP	G	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr17:48916725 () rs orientation: forward

Symbol	Name	Function Class
Cpgi9295	CpG island 9295	1365 bp proximal
Gm64620	predicted gene, 64620	1792 bp upstream