rs49235118 SNP Detail

Summary

• ID
  rs49235118
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:19428908 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GATGGCAAGA GGCAAGCTTA
  AGAACATAAA CAACAGAAAG TAATACTACT TGGCAACATC AGAATCCAGT TCTCCCACCA
  CAGCAAGCCC TGGATACCCC CCCACACACA CATAAAGCAA GACTCAGATC TGAATTTTTA
  TCTCATGAAG ATGATAAAGG ACTTTAAGAA GGTCATAAAT AACTCCCTTA AAGAAATGCA
  R
  AAAAACACAG GTAAACAAGT AGAAGCCTTT AAAGAGGAAA CACATAAATC CCTTTTAAAA
  AAATACAGGT AAACTCTGGC TGGGCAGATA AAGGGAAGCT GGAGCCGAAG GTTGGGAGAG
  AGAAGAAGGA GAAAATGGGA GAGAGCGAGA GAGAGAGAGC GAGAGAGAGA GAGAGAGAGA
  GAGAGAGAGA CAGAGAGAGA                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	LG/J	SM/J
ss134667490	ENSMUSSNP6955365	ENSEMBL	ENSEMBL_Sanger	f	SNP	A
ss320678660	CHEV_3_19274744	CHEVERUD	SCREENING_POP	f	SNP		G	A
SNP Consensus Information
SNP					Consensus Type	A/J	LG/J	SM/J
rs49235118					SNP	A	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:19428908 () rs orientation: forward

Symbol	Name	Function Class
Gm42188	predicted gene, 42188	within coordinates